Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927114.1_cds_XP_016474997.1_66967
CDS Infomation

[gene=LOC107796714] [db_xref=GeneID:107796714] [protein=threonine--tRNA ligase, mitochondrial 1-like] [protein_id=XP_016474997.1] [location=join(59188..59450,60327..60564,60697..60756,61611..61700,62455..62529,62634..62762,62847..62936,63768..63856,63934..64030,64954..65040,67269..67353,67853..67947,68142..68174,68254..68340,68641..68733,69149..69241,69374..69595,69708..69779,70476..70547,71036..71131)] [gbkey=CDS]
Sequence

ATGCTACTGGCTTCACGCCTCTTCACCCAATCGCTCATCCGCCGTCCTCCGCCGTGTAAA
CAGTTTCTCCTCCTCCGCAGTTTCTCATCAGAACCACCAATGGGAAAAACTCCGAAAGGT
TCCGAAGCTAATTCCAGCGCCGCCTCCTACCCTAAAGACGAAAGTTATCTACAAAACGTT
ATTCCTAAACGTATCGCTCTCTTCGAATCTATTCAAAATGAGCAACGCCTTCAGCGCCTT
TCGCTCTCTCCTGATCCTATCAAGATCGAGTTACCAAGTGGGACAATGAAGGAGGGGAAG
AAATGGAATACCACACCATTGGATATAGCAAAGGAGATATCAAAGAGCTTGGCTTCAAAC
GCATTGATCGCGAAGGTGAACGGGGTGCTTTGGGATTTGTTGAGGCCATTGGAAGGTGAT
TGTAAGCTAGAGCTCTTCACTTTTGACAGTGACGAAGGCCGCGACACATTTTGGCACTCG
AGTGCTCACATTCTTGGCGAGTCGTTGGAGAGGACATATGGATGCAAATTGTGTATTGGA
CCGTGTACAACAAGAGGAGAGGGTTTCTATTATGACGCCTTTTATGGTGAACTGGGATTA
AATGAGGATCATTTTAAACGGATCGAGTCGGAGGCAGCAAAAGCTGTTTCGGAGAAACAA
CCTTTTGAACGCATCGAAGTTTCTCGGCAACAAGCTCTTGATATGTTCTCTGATAATAGG
TTTAAGGTGGAAATCATTAAGGATTTACCTGAAGATAAGACAATCACAGTATACAGATGT
GGCCCCTTGGTTGATCTATGCCGTGGTCCGCATATACCAAATACTTCTTTTGTTAAAGCA
TTAGCTTGTACAAAGGCTTCATCAGCATATTGGAGGGGAGATAAGGACCGTGAAAGCTTG
CAAAGAGTTTATGGAATATCTTATCCAGATAAAAAACAGTTGAAGGAATACCTAGCTATG
CTGGAGGAAGCAAAGAAATATGATCACAGAGAGCTGACTAAGAAGCAAGAGCTTTTCTTT
TTTCATCCATTAAGCCCTGGAAGTTGTTTCTTTCTTCCACATGGTGCTCGAGTTTGCAAC
AAATTGCTGGAGTTCATAAAGAGGCAGTATTGGAAGAGAGGCTATGAGGAGGTTTGGAGT
CCAAATATGTACAACATGCAGTTGTGGGAAACTTCTGGACATGCTGCAAATTACAAGGAG
AACATGTTCGTCTTTGAGATTGAAAAACAAGAATTTGGGCTGAAGCCAATGAATTGCCCA
GGCCATTGTTTAATATTCGATCACAGAGTTCGTTCCTACAGGGAGCTACCACTCCGTCTG
GCTGACTTTGGAGTTCTACACAGGAATGAGGCCAGTGGTGCACTTACTGGCTTAACACGT
GTCAGGAGATTTCAGCAGGATGATGCTCACATCTTTTGCAGGGAGTCACAGATTAAAGAT
GAAGTCAAGGGTGTCTTAGATTTCATCAGCTATGTGTATAAGATATTTGGTTTCACTTTC
GACCTGAAGTTATCAACGAGGCCTGAAAAGTATCTCGGAGACTTAGAAAGCTGGAACAAG
GCTGAAGATGCTCTTGCGGAAGCATTGGACGAGTTCGGAAAGCCCTGGGAGAAAAACGAA
GGAGATGGAGCATTTTATGGTCCAAAAATTGATATAAGTGTTTCTGACGCAATGAGAAGA
AAATTCCAGTGTGCAACATTGCAGCTTGATTTCCAACTTCCTCAACGATTCAACCTTTCA
TACTCAGCAGAAGATGAAAATAAGAGGGAGAGACCAGTTATGATACATAGAGCTATACTT
GGGTCGGTTGAGCGTATGTTTGCTATTCTTTTGGAGCATTTCAAGGGGAAATGGCCTTTC
TGGCTTAGTCCACGTCAAGCAATGGTCTGCCCTGTTTCCGACAAATCTCAGTCATATGCT
CTGGAGCTCCGAGAGCGAATACATGATGCTGGTTATTATGTTGATGTGGATACAAGTGAC
AGGACAATCCAGAAGAAGGTACGAGAGGCTCAAGTGGCACAATATAACTATATTCTGGTT
GTTGGAGAAGCGGAAGCCAGTAGTCGGCAGGTGAGCGTTCGAGTGAGAGACAAGCCTGAT
CATCAAGTCATGACAGTTGACGACCTCCTCGGTCACTTCAAAGATATGGTTGCATCATTT
CAATAG

Peptide Sequence

PEP ID

XP_016474997.1
PEP Infomation

PREDICTED: threonine--tRNA ligase, mitochondrial 1-like [Nicotiana tabacum]
Sequence

MLLASRLFTQSLIRRPPPCKQFLLLRSFSSEPPMGKTPKGSEANSSAASYPKDESYLQNV
IPKRIALFESIQNEQRLQRLSLSPDPIKIELPSGTMKEGKKWNTTPLDIAKEISKSLASN
ALIAKVNGVLWDLLRPLEGDCKLELFTFDSDEGRDTFWHSSAHILGESLERTYGCKLCIG
PCTTRGEGFYYDAFYGELGLNEDHFKRIESEAAKAVSEKQPFERIEVSRQQALDMFSDNR
FKVEIIKDLPEDKTITVYRCGPLVDLCRGPHIPNTSFVKALACTKASSAYWRGDKDRESL
QRVYGISYPDKKQLKEYLAMLEEAKKYDHRELTKKQELFFFHPLSPGSCFFLPHGARVCN
KLLEFIKRQYWKRGYEEVWSPNMYNMQLWETSGHAANYKENMFVFEIEKQEFGLKPMNCP
GHCLIFDHRVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKD
EVKGVLDFISYVYKIFGFTFDLKLSTRPEKYLGDLESWNKAEDALAEALDEFGKPWEKNE
GDGAFYGPKIDISVSDAMRRKFQCATLQLDFQLPQRFNLSYSAEDENKRERPVMIHRAIL
GSVERMFAILLEHFKGKWPFWLSPRQAMVCPVSDKSQSYALELRERIHDAGYYVDVDTSD
RTIQKKVREAQVAQYNYILVVGEAEASSRQVSVRVRDKPDHQVMTVDDLLGHFKDMVASF
Q

Transcript Sequence

Gene sequence data has not been registered.